CAS-viewer : Visualization of Cancer Alternatively Splicing


CAS-viewer is a web-based application providing a platform of transcript isoform-driven integration of multi-omics information in multiple cancer types.

It visualizes transcript-level molecular information and provides a tool to identify its clinical association for 33 cancer types from TCGA.

One can analyze AS patterns with clinical data, along with DNA methylation in exon and intron regions, or miRNAs in 3’ UTRs. Splicing regulatory elements are also available for exploring the role of both intronic and exonic SNPs.

  ©2017 Genomics and Bioinformatics Lab. @ University of Utah School of Medicine, Department of Biomedical Informatics.